Save heatmap — save_hm • GaitiLabUtils

Save heatmap with optimal output size (removing redundant whitespace)

Usage

save_hm(
  hm_obj,
  annotation_legend_side = "right",
  heatmap_legend_side = "right",
  merge_legend = TRUE,
  heatmap_legend_list = NULL,
  annotation_legend_list = NULL,
  output_file = "heatmap.pdf"
)

Arguments

hm_obj: heatmap created with ComplexHeatmap or create_hm()
annotation_legend_side: position of annotation legend by default = 'right'
heatmap_legend_side: position of annotation legend by default = 'right'
merge_legend: merge legends, by default = TRUE
heatmap_legend_list: list of custom legends, by default = NULL
annotation_legend_list: list of custom legends, by default = NULL
output_file: path for output file by default = "heatmap.pdf"