Filter agg res by user constraints
filter_agg_res.Rd
Filter agg res by user constraints
Usage
filter_agg_res(
condition_var = "Condition_dummy",
input_dir = "",
interactions_agg_binarized = "",
interactions_agg_continuous = "",
output_dir = "."
)
Arguments
- condition_var
Variabile containing the 'condition' (group/category) of the samples (default = "Condition_dummy")
- input_dir
directory with '402a_filtering_detect_in_multi_samples.rds' and '402b_aggregation_samples.rds', alternatively specify path separately ('interactions_agg_binarized' & 'interactions_agg_continuous') (default = "")
- interactions_agg_binarized
path to '402a_filtering_detect_in_multi_samples.rds' (default = "")
- interactions_agg_continuous
path to '402b_aggregation_samples.rds' (default = "")
- output_dir
output directory for saving output (default = '.')